Some very good points, and I probably should have chucked a bit more of a stink about the rings being incorrect. Shop did have the piston and bored and honed to size (0.5mm oversize, they said a 0.25 would probably work but a 0.5 is better to ensure it's perfect)
Rattle/knock was not there before the seize, however extremely rattley afterwards (piston pics posted earlier in the thread will reveal why) so difficult to tell if the valves have gone out at all. I can't pull the head to check piston clearance as that would mean a new head gasket wouldnt it?
Rocker pin has no obvious directional markings. It's got a hole right through the middle, and 1 smaller hole on each end (on opposite sides) so it looks like it should fit in either way. I'm gonna pull it out and turn it around to see if it changes anything
Here's a vid of the sound
http://tinypic.com/player.php?v=f2etg&s=6 (holy hell I didn't realise my phone took such shocking video and audio quality) you can hear the knock/rattle as it accelerates. It gets worse as it heats up. Infact there's barely any knock when its cold and I wouldn't say anythings wrong. But after a couple K's of riding its really noticeable especially under acceleration.
There's also a scratchy noise which gets really bad once it fully warms up. Sounds like its coming from behind the cam cover. I actually removed the cam cover a couple days ago and I could see its edged a groove into the cam sprocket retainer. I'm going to pull it again shortly so i'll throw up a pic, but I can't for the life of me figure out why its doing that. From what I can tell there should only be a rubber seal which goes over the camshaft and into the retainer plate for the 6v stator (which doesn't exist since this is a 12v model). As well as a gasket one would assume the gasket should provide more than enough clearance so it doesn't touch the cam retainer, but it certainly looks like its been touching. Plus that seal had quite a bit of metal shavings in its groove. Have I maybe left a part out?
I'm also going to adjust the clearance to 0.08 to see if the rattle/knock goes away
edit: Yep... definately wearing a bit of a groove. That's the scratchy sound figured out
Why the heck is it occuring in the first place though?
edit2: With the retainer plate off I can push/pull the camshaft A LOT. Is it supposed to have a lot of freeplay in it? clearly that's not helping but I can't see anything in the parts fiche that would hold it more securely in place
edit3: looks like there's supposed to be a dowel pin in that little hole in the camshaft. I don't remember seeing one so its LOOONG gone if it's supposed to be there. Is that the problem? I don't see how it plays in the picture. How does a dowel pin prevent movement if it's not sitting in any grooves